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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
candidate regulatory elements
84
target gene predictions
79
chromatin state
48
histone modifications
44
accessible chromatin
36
Fine-mapped variants
32
eQTL
21
gene expression
19
variant allelic effects
16
binding sites
Date released
201
September, 2022
120
February, 2021
39
March, 2020
29
January, 2020
23
June, 2020
21
January, 2022
19
May, 2020
18
February, 2020
11
May, 2021
6
August, 2017
6
October, 2022
4
May, 2019
3
February, 2024
3
March, 2024
3
September, 2023
1
November, 2019
Available data
338
bed bed3+
73
bed bed9
69
tsv
21
bigWig
6
bigBed bed9
Organism
506
Homo sapiens
Biosample type
384
tissue
77
cell line
41
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
507
AMP
4
ENCODE
Genome assembly (visualization)
459
hg19
162
GRCh38
BIOSAMPLE
TYPE
507 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
gene expression
variant allelic effects
binding sites
tissue
brain
29
16
18
3
2
2
1
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 62 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 9 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
epithelial cell of esophagus
2
1
1
2
cardiac fibroblast
3
2
+ See 5 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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