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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
263
candidate regulatory elements
156
target gene predictions
150
chromatin state
64
accessible chromatin
55
histone modifications
45
Fine-mapped variants
38
eQTL
32
gene expression
26
variant allelic effects
23
binding sites
2
caQTL
1
differential activity
Date released
393
September, 2022
205
February, 2021
50
March, 2020
35
January, 2020
28
June, 2020
27
February, 2020
27
May, 2020
20
January, 2022
17
May, 2021
16
February, 2024
9
August, 2017
9
October, 2022
6
May, 2019
3
March, 2024
3
May, 2022
3
September, 2023
2
November, 2019
1
August, 2021
1
October, 2019
Available data
593
bed bed3+
141
bed bed9
87
tsv
31
bigWig
10
bigBed bed9
Organism
854
Homo sapiens
Biosample type
680
tissue
94
cell line
74
primary cell
6
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
855
AMP
11
ENCODE
Genome assembly (visualization)
801
hg19
248
GRCh38
BIOSAMPLE
TYPE
855 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
gene expression
variant allelic effects
binding sites
caQTL
differential activity
tissue
brain
29
16
18
2
3
2
1
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
tibial nerve
6
3
4
3
3
2
2
2
+ See 80 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 12 more…
primary cell
skeletal muscle satellite cell
2
1
2
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
skeletal muscle cell
2
1
1
1
1
+ See 13 more…
in vitro differentiated cells
hippocampal neuron
1
1
myotube
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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