Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
117
target gene predictions
113
candidate regulatory elements
63
chromatin state
33
accessible chromatin
29
binding sites
25
gene expression
17
histone modifications
11
variant allelic effects
9
Fine-mapped variants
9
eQTL
4
differential activity
3
caQTL
Date released
162
September, 2022
99
February, 2021
68
February, 2024
16
June, 2020
14
March, 2020
11
January, 2020
11
May, 2020
10
May, 2021
9
August, 2021
6
January, 2022
5
February, 2020
4
February, 2023
4
March, 2023
3
March, 2024
3
November, 2019
3
October, 2022
2
August, 2017
2
October, 2019
1
May, 2019
Available data
323
bed bed3+
61
bed bed9
39
tsv
18
bigWig
8
bigBed bed9
Organism
433
Homo sapiens
Biosample type
154
tissue
133
cell line
115
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
433
AMP
20
KPMP
9
ENCODE
2
LungMap
Genome assembly (visualization)
393
hg19
159
GRCh38
BIOSAMPLE
TYPE
433 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
differential activity
caQTL
tissue
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
2
3
3
3
1
2
3
2
ascending aorta
2
4
3
1
1
1
3
1
chorionic villus
4
8
4
aorta
4
4
4
1
+ See 16 more…
cell line
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 16 more…
primary cell
endothelial cell of umbilical vein
4
6
5
2
2
1
trophoblast cell
5
7
4
1
1
endothelial cell of hepatic sinusoid
4
6
4
dermis blood vessel endothelial cell
2
6
2
fibroblast of pulmonary artery
1
2
1
1
2
1
+ See 12 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
See all biosamples
Download