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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
target gene predictions
90
candidate regulatory elements
43
chromatin state
15
binding sites
14
accessible chromatin
13
gene expression
11
histone modifications
5
eQTL
3
Fine-mapped variants
2
variant allelic effects
Date released
126
September, 2022
72
February, 2021
53
February, 2024
14
June, 2020
8
August, 2021
8
May, 2021
5
March, 2020
4
January, 2022
2
March, 2024
2
October, 2022
1
August, 2017
1
February, 2020
1
January, 2020
Available data
234
bed bed3+
42
bed bed9
17
tsv
Organism
297
Homo sapiens
Biosample type
130
cell line
106
tissue
30
in vitro differentiated cells
30
primary cell
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
297
AMP
6
ENCODE
Genome assembly (visualization)
280
hg19
101
GRCh38
BIOSAMPLE
TYPE
297 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
gene expression
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
cell line
H1-hESC
39
1
1
2
1
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 15 more…
tissue
spinal cord
8
14
7
1
1
chorionic villus
4
8
4
esophagus muscularis mucosa
2
5
2
1
1
esophagus squamous epithelium
2
6
2
1
trophoblast
3
4
2
1
1
+ See 9 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
epithelial cell of esophagus
1
2
1
2
astrocyte of the spinal cord
1
2
1
primordial germ cell
1
1
stem cell
H1-hESC
1
See all biosamples
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