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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
109
target gene predictions
99
candidate regulatory elements
52
chromatin state
16
binding sites
15
accessible chromatin
15
histone modifications
10
gene expression
1
eQTL
Date released
153
September, 2022
77
February, 2021
51
February, 2024
15
June, 2020
8
August, 2021
8
May, 2021
2
October, 2022
1
August, 2017
1
January, 2022
1
March, 2020
Available data
255
bed bed3+
51
bed bed9
10
tsv
Organism
317
Homo sapiens
Biosample type
130
cell line
117
tissue
39
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
317
AMP
3
ENCODE
Genome assembly (visualization)
306
hg19
103
GRCh38
BIOSAMPLE
TYPE
317 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
cell line
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 15 more…
tissue
placenta
15
26
14
1
1
2
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
chorion membrane
3
3
3
1
umbilical cord
1
2
1
1
1
+ See 6 more…
primary cell
trophoblast cell
5
7
4
1
1
fibroblast of villous mesenchyme
1
2
1
2
1
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
epithelial cell of amnion
1
1
1
+ See 3 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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