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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
candidate regulatory elements
149
target gene predictions
87
chromatin state
20
accessible chromatin
19
binding sites
19
histone modifications
14
gene expression
3
eQTL
3
variant allelic effects
Date released
245
September, 2022
124
February, 2021
57
February, 2024
20
June, 2020
13
May, 2021
8
August, 2021
5
August, 2017
3
January, 2022
3
March, 2020
3
March, 2024
2
October, 2022
1
February, 2020
Available data
385
bed bed3+
82
bed bed9
13
tsv
Organism
484
Homo sapiens
Biosample type
267
tissue
161
cell line
30
in vitro differentiated cells
25
primary cell
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
484
AMP
21
ENCODE
Genome assembly (visualization)
467
hg19
138
GRCh38
BIOSAMPLE
TYPE
484 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
chorionic villus
8
4
4
+ See 21 more…
cell line
H1-hESC
1
39
1
1
2
1
8
H9
7
8
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
+ See 22 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
7
5
4
1
1
enterocyte
3
primordial germ cell
1
1
intestinal epithelial cell
1
pericardium fibroblast
1
stem cell
H1-hESC
1
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