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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
104
target gene predictions
80
candidate regulatory elements
45
chromatin state
34
gene expression
30
accessible chromatin
26
binding sites
25
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
127
September, 2022
80
February, 2024
79
February, 2021
18
August, 2021
15
June, 2020
11
March, 2020
10
May, 2021
4
August, 2017
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
May, 2022
2
October, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
272
bed bed3+
41
bed bed9
38
tsv
19
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
364
Homo sapiens
Biosample type
155
cell line
93
tissue
78
primary cell
37
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
364
AMP
7
ENCODE
Genome assembly (visualization)
322
hg19
133
GRCh38
2
hg18
BIOSAMPLE
TYPE
364 results
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target gene predictions
candidate regulatory elements
chromatin state
gene expression
accessible chromatin
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
H1-hESC
39
1
1
8
1
2
1
HepG2
3
2
2
2
3
5
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 18 more…
tissue
liver
10
13
9
1
4
1
2
7
1
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
right lobe of liver
1
2
1
1
1
3
embryonic facial prominence
1
1
1
1
+ See 3 more…
primary cell
hepatocyte
2
1
1
13
7
1
4
2
trophoblast cell
5
7
4
1
1
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
1
1
1
1
2
1
1
pancreatic endothelial cell
1
3
+ See 2 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
hepatocyte
1
2
1
+ See 5 more…
stem cell
H1-hESC
1
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