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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
160
gene expression
accessible chromatin
100
candidate regulatory elements
63
target gene predictions
53
chromatin state
43
binding sites
41
variant allelic effects
28
differential activity
28
histone modifications
3
eQTL
2
caQTL
Date released
196
February, 2021
146
September, 2022
50
February, 2024
36
March, 2023
27
May, 2021
15
August, 2021
14
May, 2020
9
February, 2020
6
August, 2018
6
March, 2020
6
October, 2022
3
August, 2017
2
February, 2023
2
January, 2020
2
March, 2024
1
July, 2020
Available data
279
bed bed3+
169
tsv
78
txt
50
bed bed9
16
bigWig
7
bigBed narrowPeak
6
csv
2
bigBed bed9
Organism
521
Homo sapiens
Biosample type
446
primary cell
29
cell line
29
tissue
17
in vitro differentiated cells
Organ
521
epithelium
462
kidney
424
brain
345
musculature of body
332
connective tissue
293
lung
260
intestine
225
heart
224
limb
206
bodily fluid
203
embryo
195
blood
194
vasculature
193
pancreas
186
skin of body
161
large intestine
158
blood vessel
137
extraembryonic component
131
liver
107
stomach
82
adipose tissue
79
small intestine
79
uterus
77
mammary gland
73
bone element
73
prostate gland
69
placenta
62
adrenal gland
61
penis
60
ureter
59
artery
54
lymph node
50
eye
47
thymus
44
gonad
41
spinal cord
39
esophagus
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
vein
20
ovary
20
thyroid gland
18
mouth
13
pituitary gland
12
breast
12
bronchus
11
lymphatic vessel
10
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
521
AMP
155
KPMP
49
ENCODE
10
T1D
2
community
Genome assembly (visualization)
330
hg19
70
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
521 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
1
2
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
foreskin keratinocyte
11
4
4
glomerular endothelial cell
14
2
1
1
1
endothelial cell of umbilical vein
6
4
5
2
1
+ See 82 more…
cell line
EndoC_BH1
8
1
1
1
keratinocyte
3
1
colon epithelial cell
1
1
1
choroid plexus epithelial cell
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 5 more…
tissue
breast epithelium
5
3
2
esophagus squamous epithelium
6
2
2
kidney epithelium
1
1
breast - mammary tissue
1
corneal epithelium
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
mammary gland epithelial cell
1
1
+ See 3 more…
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