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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
160
gene expression
112
accessible chromatin
52
candidate regulatory elements
43
binding sites
41
variant allelic effects
28
differential activity
27
histone modifications
14
target gene predictions
5
chromatin state
3
eQTL
2
caQTL
Date released
196
February, 2021
September, 2022
76
February, 2024
36
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
290
bed bed3+
169
tsv
78
bigWig
78
txt
13
bigBed narrowPeak
6
csv
2
bed bed9
2
bigBed bed9
Organism
487
Homo sapiens
Biosample type
377
primary cell
49
tissue
38
cell line
23
in vitro differentiated cells
Organ
487
epithelium
286
brain
284
kidney
264
connective tissue
193
pancreas
160
musculature of body
147
vasculature
143
bodily fluid
138
blood
137
heart
132
embryo
119
blood vessel
106
intestine
106
limb
105
liver
92
skin of body
89
lung
78
eye
70
large intestine
69
uterus
65
adipose tissue
49
artery
44
bone element
44
extraembryonic component
41
stomach
39
mammary gland
39
prostate gland
38
lymph node
34
penis
25
ureter
24
gonad
23
placenta
23
small intestine
21
adrenal gland
20
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
15
thymus
14
testis
13
pituitary gland
9
lymphoid tissue
9
ovary
9
skeleton
9
thyroid gland
7
bone marrow
7
breast
7
bronchus
7
mouth
6
lymphatic vessel
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
487
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
295
hg19
58
GRCh38
month_released!
September, 2022
BIOSAMPLE
TYPE
487 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
binding sites
variant allelic effects
differential activity
histone modifications
target gene predictions
chromatin state
eQTL
caQTL
primary cell
hepatocyte
13
7
1
2
4
1
endothelial cell
9
4
2
2
1
1
2
epithelial cell of proximal tubule
16
1
1
1
1
glomerular endothelial cell
14
2
1
1
endothelial cell of hepatic sinusoid
4
4
6
+ See 82 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
1
esophagus squamous epithelium
1
4
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 4 more…
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