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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
candidate regulatory elements
49
target gene predictions
43
chromatin state
21
binding sites
14
histone modifications
12
accessible chromatin
6
eQTL
4
gene expression
1
variant allelic effects
Date released
126
September, 2022
80
February, 2021
12
June, 2020
6
January, 2022
6
May, 2021
5
October, 2022
4
March, 2024
1
August, 2017
1
February, 2024
1
March, 2020
Available data
190
bed bed3+
42
bed bed9
4
tsv
Organism
242
Homo sapiens
Biosample type
92
primary cell
77
cell line
64
tissue
9
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
242
AMP
12
ENCODE
Genome assembly (visualization)
232
hg19
48
GRCh38
BIOSAMPLE
TYPE
242 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
4
2
1
keratinocyte
3
3
3
1
2
1
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
NT2-D1 cell
1
1
1
2
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
+ See 17 more…
tissue
ovary
8
6
4
1
1
1
testis
7
3
3
1
1
1
1
1
lower leg skin
6
2
2
skin of body
1
1
1
3
suprapubic skin
3
+ See 4 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
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