Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
117
candidate regulatory elements
69
target gene predictions
67
chromatin state
40
accessible chromatin
29
gene expression
16
histone modifications
15
binding sites
13
eQTL
12
Fine-mapped variants
12
variant allelic effects
4
differential activity
1
caQTL
Date released
184
September, 2022
84
February, 2021
29
February, 2024
19
March, 2020
13
May, 2020
11
June, 2020
10
August, 2021
10
January, 2020
8
February, 2020
6
May, 2021
4
March, 2023
3
August, 2017
3
January, 2022
3
November, 2019
2
May, 2019
2
May, 2022
1
July, 2020
1
March, 2024
1
October, 2022
1
September, 2018
Available data
271
bed bed3+
64
bed bed9
45
tsv
33
bigWig
5
bigBed bed9
3
csv
1
bam
Organism
395
Homo sapiens
Biosample type
294
tissue
59
primary cell
35
cell line
7
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
395
AMP
5
ENCODE
Genome assembly (visualization)
356
hg19
133
GRCh38
2
hg18
BIOSAMPLE
TYPE
395 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
liver
13
10
9
4
1
2
1
7
1
1
tibial nerve
6
3
4
3
2
2
3
2
tibial artery
3
2
3
3
1
2
3
2
+ See 20 more…
primary cell
hepatocyte
1
2
1
7
13
4
1
2
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
1
1
1
2
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
+ See 1 more…
cell line
HepG2
2
3
2
2
5
3
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download