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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
target gene predictions
32
candidate regulatory elements
26
gene expression
22
accessible chromatin
21
chromatin state
17
binding sites
16
histone modifications
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
80
February, 2024
58
September, 2022
36
February, 2021
10
August, 2021
10
March, 2020
7
June, 2020
5
May, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
March, 2024
2
May, 2022
2
October, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
170
bed bed3+
30
tsv
19
bigWig
18
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
232
Homo sapiens
Biosample type
93
cell line
71
tissue
61
primary cell
7
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
232
AMP
7
ENCODE
Genome assembly (visualization)
197
hg19
111
GRCh38
2
hg18
BIOSAMPLE
TYPE
232 results
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Clear Filters
target gene predictions
candidate regulatory elements
gene expression
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
HeLa-S3
55
5
3
1
HepG2
3
2
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
+ See 1 more…
tissue
liver
10
13
1
4
9
1
2
7
1
1
right lobe of liver
1
2
1
1
1
3
uterus
2
3
1
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
+ See 1 more…
primary cell
hepatocyte
2
1
13
7
1
1
4
2
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
1
1
1
2
1
1
1
pancreatic endothelial cell
1
3
Ishikawa
1
1
1
+ See 1 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
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