Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
78
target gene predictions
74
chromatin state
49
histone modifications
43
accessible chromatin
36
Fine-mapped variants
29
eQTL
19
gene expression
18
binding sites
17
variant allelic effects
Date released
186
September, 2022
115
February, 2021
38
March, 2020
29
January, 2020
22
June, 2020
19
May, 2020
18
February, 2020
18
January, 2022
11
May, 2021
6
August, 2017
6
October, 2022
4
May, 2019
3
September, 2023
1
February, 2024
1
March, 2024
1
November, 2019
Available data
319
bed bed3+
68
bed bed9
67
tsv
21
bigWig
6
bigBed bed9
Organism
477
Homo sapiens
Biosample type
349
tissue
79
cell line
43
primary cell
6
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
478
AMP
5
KPMP
3
ENCODE
1
LungMap
Genome assembly (visualization)
435
hg19
154
GRCh38
BIOSAMPLE
TYPE
478 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
gene expression
binding sites
variant allelic effects
tissue
brain
29
16
18
3
2
2
1
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 56 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 10 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
dermis lymphatic vessel endothelial cell
2
2
2
cardiac fibroblast
3
2
+ See 6 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download