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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
gene expression
44
accessible chromatin
31
differential activity
27
target gene predictions
24
candidate regulatory elements
17
chromatin state
15
eQTL
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
45
March, 2023
44
September, 2022
33
May, 2021
30
February, 2021
19
February, 2024
9
March, 2020
8
August, 2021
7
August, 2018
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
May, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
110
bed bed3+
76
tsv
32
bigWig
13
bed bed9
10
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
226
Homo sapiens
Biosample type
111
tissue
81
primary cell
31
cell line
3
in vitro differentiated cells
Organ
597
epithelium
493
kidney
449
brain
368
connective tissue
357
musculature of body
298
lung
267
intestine
236
limb
235
heart
226
pancreas
218
bodily fluid
213
embryo
207
blood
207
vasculature
193
skin of body
170
blood vessel
168
large intestine
147
liver
143
extraembryonic component
108
stomach
103
eye
86
adipose tissue
86
bone element
81
uterus
80
mammary gland
80
small intestine
77
prostate gland
71
placenta
66
artery
64
penis
62
adrenal gland
62
lymph node
61
ureter
48
gonad
48
thymus
43
spinal cord
39
esophagus
34
spleen
26
testis
24
lymphoid tissue
23
nerve
22
vein
21
ovary
20
thyroid gland
19
mouth
18
skeleton
13
breast
13
pituitary gland
12
bronchus
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
226
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
137
hg19
43
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
226 results
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Clear Filters
gene expression
accessible chromatin
differential activity
target gene predictions
candidate regulatory elements
chromatin state
eQTL
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
11
6
1
3
13
1
2
2
2
2
body of pancreas
2
5
8
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
primary cell
pancreatic ductal cell
3
3
3
1
2
1
pancreatic beta cell
3
4
3
1
pancreatic alpha cell
3
3
3
1
pancreatic acinar cell
3
2
3
1
pancreatic delta cell
3
2
3
1
+ See 11 more…
cell line
EndoC_BH1
8
8
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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