Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
35
gene expression
31
differential activity
24
accessible chromatin
12
target gene predictions
8
variant allelic effects
4
candidate regulatory elements
4
histone modifications
3
chromatin state
2
binding sites
Date released
39
March, 2023
28
May, 2021
15
February, 2024
13
September, 2022
10
February, 2021
7
August, 2018
5
October, 2019
1
February, 2023
1
June, 2020
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
Available data
59
tsv
52
bed bed3+
20
bigWig
14
bigBed narrowPeak
3
bam
3
bed bed9
3
bed gappedPeak
3
csv
3
xls
Organism
123
Homo sapiens
Biosample type
tissue
88
primary cell
32
cell line
3
in vitro differentiated cells
Organ
577
epithelium
293
connective tissue
214
bodily fluid
208
kidney
204
blood
178
embryo
169
skin of body
138
vasculature
123
pancreas
118
lung
117
brain
95
blood vessel
93
liver
79
mammary gland
68
uterus
64
bone element
63
prostate gland
62
lymph node
62
penis
58
musculature of body
45
extraembryonic component
38
intestine
35
eye
34
large intestine
31
heart
28
artery
22
vein
13
bronchus
12
lymphatic vessel
11
placenta
10
bone marrow
10
pituitary gland
9
gonad
8
limb
8
mouth
8
testis
7
spinal cord
6
esophagus
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
123
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
57
hg19
9
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
123 results
search-icon
table-tab-icon
Clear Filters
gene expression
differential activity
accessible chromatin
target gene predictions
variant allelic effects
candidate regulatory elements
histone modifications
chromatin state
binding sites
primary cell
pancreatic ductal cell
3
3
3
1
1
2
1
pancreatic beta cell
3
3
4
1
1
pancreatic alpha cell
3
3
3
1
1
pancreatic acinar cell
3
3
2
1
1
pancreatic delta cell
3
3
2
1
1
+ See 11 more…
cell line
EndoC_BH1
8
1
8
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download