Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
97
candidate regulatory elements
87
target gene predictions
66
binding sites
60
chromatin state
40
accessible chromatin
32
histone modifications
16
gene expression
15
variant allelic effects
9
Fine-mapped variants
9
eQTL
4
differential activity
3
caQTL
Date released
150
September, 2022
121
February, 2021
45
February, 2024
23
October, 2022
18
June, 2020
16
January, 2020
15
May, 2020
12
March, 2020
7
May, 2021
5
February, 2020
4
February, 2023
4
January, 2022
4
March, 2023
3
August, 2017
3
August, 2021
3
November, 2019
2
March, 2024
2
October, 2019
1
May, 2019
Available data
341
bed bed3+
57
bed bed9
30
tsv
23
bigWig
8
bigBed bed9
2
txt
Organism
438
Homo sapiens
Biosample type
206
cell line
134
primary cell
96
tissue
2
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
438
AMP
35
KPMP
6
ENCODE
3
LungMap
Genome assembly (visualization)
409
hg19
135
GRCh38
BIOSAMPLE
TYPE
438 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
variant allelic effects
Fine-mapped variants
eQTL
differential activity
caQTL
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 27 more…
primary cell
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
6
4
4
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
2
1
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 19 more…
tissue
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
3
2
3
3
1
2
3
2
ascending aorta
4
2
3
1
1
1
3
1
aorta
4
4
4
1
thoracic aorta
4
2
3
1
1
+ See 6 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download