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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
gene expression
21
accessible chromatin
19
candidate regulatory elements
16
target gene predictions
13
chromatin state
8
binding sites
7
eQTL
7
histone modifications
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
33
September, 2022
29
February, 2024
18
February, 2021
9
March, 2020
8
August, 2021
5
November, 2021
4
March, 2023
3
January, 2020
3
June, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
76
bed bed3+
28
tsv
22
bigWig
11
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
127
Homo sapiens
Biosample type
63
primary cell
57
tissue
cell line
7
in vitro differentiated cells
Organ
906
epithelium
611
kidney
425
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
127
liver
119
stomach
99
eye
88
embryo
84
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
122
AMP
5
ENCODE
Genome assembly (visualization)
97
hg19
52
GRCh38
hg18
biosample_type!
cell line
assembly!
hg18
BIOSAMPLE
TYPE
127 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
8
1
3
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
3
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
1
4
13
10
9
1
6
2
1
1
right lobe of liver
1
2
1
1
1
3
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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