Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1265
candidate regulatory elements
target gene predictions
709
chromatin state
588
gene expression
450
accessible chromatin
299
histone modifications
161
eQTL
157
differential activity
136
binding sites
126
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
Date released
1244
September, 2022
1094
February, 2021
281
September, 2023
November, 2021
213
May, 2021
161
February, 2024
129
May, 2020
116
June, 2020
92
January, 2022
88
August, 2021
84
January, 2020
79
March, 2020
64
February, 2020
61
March, 2023
42
May, 2022
31
February, 2023
31
October, 2022
29
March, 2024
28
January, 2021
26
August, 2017
26
November, 2022
19
April, 2020
12
October, 2019
11
November, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
Available data
2336
bed bed3+
803
tsv
650
bed bed9
305
bigWig
108
txt
35
bigBed bed9
27
bed bed9+
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
3953
Homo sapiens
Biosample type
2134
tissue
cell line
1864
primary cell
in vitro differentiated cells
1
stem cell
Organ
672
epithelium
539
kidney
333
brain
283
connective tissue
273
musculature of body
217
vasculature
190
heart
189
limb
179
intestine
179
pancreas
170
blood vessel
157
lung
102
extraembryonic component
102
liver
101
large intestine
91
skin of body
84
stomach
81
eye
73
adipose tissue
63
artery
59
small intestine
52
placenta
51
ureter
46
adrenal gland
43
embryo
36
penis
34
mammary gland
34
thymus
33
esophagus
32
gonad
31
spinal cord
29
bone element
26
spleen
22
nerve
20
prostate gland
17
vein
16
testis
16
thyroid gland
15
ovary
15
skeleton
14
lymphoid tissue
14
uterus
13
bodily fluid
12
blood
12
bronchus
12
lymphatic vessel
12
mouth
10
breast
9
bone marrow
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
pituitary gland
1
pericardium
Project
3662
AMP
281
KPMP
32
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
3139
hg19
1102
GRCh38
3
hg18
biosample_type!
cell line
in vitro differentiated cells
files.file_type!
bigBed narrowPeak
month_released!
November, 2021
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
4001 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
gene expression
accessible chromatin
histone modifications
eQTL
differential activity
binding sites
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
tissue
heart
37
21
3
5
1
1
2
kidney
29
16
7
10
2
1
1
1
stomach
40
19
1
3
1
1
brain
29
18
1
2
3
2
1
1
lung
33
16
1
1
+ See 256 more…
primary cell
monocyte
15
18
86
4
1
2
1
1
CD8-positive, alpha-beta T cell
7
1
3
3
30
common myeloid progenitor, CD34-positive
27
13
hepatocyte
1
1
13
7
4
1
2
B cell
14
8
2
3
+ See 384 more…
stem cell
H1-hESC
1
See all biosamples
Download