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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1265
candidate regulatory elements
890
target gene predictions
579
gene expression
299
histone modifications
169
accessible chromatin
161
eQTL
157
differential activity
136
binding sites
126
variant allelic effects
74
Fine-mapped variants
59
chromatin state
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
Date released
1241
September, 2022
1085
February, 2021
282
September, 2023
274
May, 2021
140
February, 2024
116
June, 2020
111
March, 2020
111
November, 2021
92
January, 2022
90
May, 2020
68
August, 2021
64
February, 2020
61
March, 2023
35
May, 2022
31
October, 2022
29
March, 2024
28
January, 2021
26
August, 2017
18
January, 2020
17
November, 2022
12
February, 2023
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
November, 2019
1
November, 2020
Available data
3451
bed bed3+
803
tsv
bed bed9
bigWig
108
txt
35
bigBed bed9
27
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
3947
Homo sapiens
Biosample type
cell line
2048
tissue
1897
primary cell
in vitro differentiated cells
4
stem cell
Organ
660
epithelium
506
kidney
310
brain
292
connective tissue
272
musculature of body
193
intestine
192
vasculature
179
heart
174
limb
174
pancreas
159
lung
150
blood vessel
108
large intestine
104
extraembryonic component
100
skin of body
91
stomach
89
liver
72
adipose tissue
63
small intestine
56
artery
53
adrenal gland
53
placenta
51
eye
48
ureter
45
embryo
38
mammary gland
37
penis
37
thymus
36
esophagus
35
gonad
32
spinal cord
27
spleen
22
bone element
21
prostate gland
19
nerve
18
ovary
18
thyroid gland
16
testis
16
uterus
16
vein
14
lymphoid tissue
13
bodily fluid
12
blood
12
bronchus
12
lymphatic vessel
12
mouth
11
breast
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
7
skeleton
5
trachea
3
pituitary gland
1
pericardium
Project
3520
AMP
281
KPMP
111
ENCODE
32
T1D
5
ITG
2
community
Genome assembly (visualization)
3098
hg19
422
GRCh38
3
hg18
biosample_type!
cell line
in vitro differentiated cells
files.file_type!
bigWig
bed bed9
BIOSAMPLE
TYPE
3951 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
histone modifications
accessible chromatin
eQTL
differential activity
binding sites
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
tissue
stomach
40
21
1
1
3
1
heart
37
20
3
1
2
1
2
kidney
29
14
7
2
1
1
1
1
brain
29
16
1
3
1
2
1
1
lung
33
17
1
1
+ See 242 more…
primary cell
monocyte
2
15
86
2
4
1
2
1
1
CD8-positive, alpha-beta T cell
7
5
3
30
1
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 412 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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