Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1265
candidate regulatory elements
893
target gene predictions
678
accessible chromatin
299
histone modifications
136
binding sites
114
variant allelic effects
31
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1245
September, 2022
944
February, 2021
333
November, 2021
208
May, 2021
126
May, 2020
124
February, 2024
115
June, 2020
62
January, 2020
56
January, 2021
33
March, 2020
31
February, 2023
31
October, 2022
28
August, 2021
26
November, 2022
25
August, 2017
19
April, 2020
15
May, 2022
10
November, 2019
7
October, 2019
3
September, 2018
2
January, 2022
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
1
September, 2023
Available data
3451
bed bed3+
801
tsv
650
bed bed9
530
bigWig
108
txt
35
bigBed bed9
27
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
3405
Homo sapiens
Biosample type
cell line
1850
tissue
1595
primary cell
in vitro differentiated cells
4
stem cell
Organ
499
epithelium
277
kidney
265
musculature of body
258
connective tissue
240
brain
198
intestine
169
limb
166
lung
165
heart
151
vasculature
139
pancreas
118
blood vessel
107
large intestine
106
extraembryonic component
100
skin of body
93
stomach
83
eye
73
liver
64
small intestine
57
adrenal gland
54
placenta
51
ureter
47
embryo
45
adipose tissue
43
artery
41
mammary gland
38
thymus
37
penis
33
esophagus
31
gonad
27
bone element
26
spinal cord
26
spleen
19
prostate gland
17
ovary
17
thyroid gland
15
skeleton
15
vein
14
bronchus
14
nerve
14
uterus
13
lymphoid tissue
13
testis
11
bone marrow
10
bodily fluid
10
lymphatic vessel
10
mouth
9
blood
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
1
pituitary gland
Project
3038
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
3444
hg19
594
GRCh38
biosample_type!
cell line
in vitro differentiated cells
BIOSAMPLE
TYPE
3451 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
heart
37
20
5
1
1
2
stomach
40
21
3
1
kidney
29
14
10
2
1
1
1
brain
29
16
2
3
1
1
muscle of arm
33
16
1
1
+ See 217 more…
primary cell
monocyte
2
18
86
1
1
1
CD8-positive, alpha-beta T cell
7
5
4
30
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
15
1
2
2
2
1
+ See 329 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download