Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
accessible chromatin
16
candidate regulatory elements
8
chromatin state
8
target gene predictions
3
binding sites
3
histone modifications
2
variant allelic effects
1
eQTL
1
gene expression
Date released
24
February, 2023
24
September, 2022
16
November, 2022
13
February, 2021
4
June, 2020
4
November, 2021
2
February, 2020
2
January, 2020
2
May, 2020
1
February, 2024
1
October, 2022
Available data
83
bed bed3+
34
bigWig
8
bed bed9
2
tsv
Organism
93
Homo sapiens
Biosample type
70
tissue
23
primary cell
cell line
in vitro differentiated cells
Organ
880
epithelium
610
kidney
385
brain
379
connective tissue
356
musculature of body
255
intestine
253
vasculature
245
heart
240
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
121
liver
119
stomach
93
eye
85
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
58
embryo
49
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
17
lymphatic vessel
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
89
AMP
4
ENCODE
Genome assembly (visualization)
91
hg19
15
GRCh38
biosample_type!
cell line
in vitro differentiated cells
BIOSAMPLE
TYPE
93 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
binding sites
histone modifications
variant allelic effects
eQTL
gene expression
tissue
retina
23
6
3
3
1
1
1
1
1
pigmented layer of retina
20
eye
1
4
2
2
corneal epithelium
1
primary cell
retinal pigment epithelial cell
3
2
1
1
2
1
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
2
1
1
Muller cell
2
retinal pigment epithelial cell
1
+ See 1 more…
See all biosamples
Download