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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
529
accessible chromatin
431
target gene predictions
391
candidate regulatory elements
363
gene expression
304
histone modifications
233
chromatin state
137
binding sites
96
differential activity
82
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
565
September, 2022
552
February, 2021
330
November, 2021
295
May, 2021
184
February, 2024
146
September, 2023
87
May, 2020
68
June, 2020
56
January, 2021
55
March, 2023
53
August, 2021
40
January, 2022
40
May, 2022
30
October, 2022
27
November, 2022
19
April, 2020
19
January, 2020
17
March, 2020
11
August, 2017
9
August, 2018
9
February, 2020
9
October, 2019
5
February, 2023
3
November, 2019
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1895
bed bed3+
426
tsv
404
bigWig
195
bed bed9
27
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2589
Homo sapiens
Biosample type
tissue
cell line
2160
primary cell
469
in vitro differentiated cells
4
stem cell
Organ
845
epithelium
332
connective tissue
kidney
171
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
53
embryo
52
musculature of body
49
mammary gland
47
penis
45
extraembryonic component
40
brain
34
lung
32
heart
29
artery
29
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
2085
AMP
330
ENCODE
141
KPMP
60
T1D
19
LungMap
Genome assembly (visualization)
2134
hg19
753
GRCh38
biosample_type!
cell line
tissue
organ_slims!
kidney
BIOSAMPLE
TYPE
2635 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
histone modifications
chromatin state
binding sites
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
18
2
15
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
7
3
30
1
B cell
6
10
14
2
8
endothelial cell
15
7
9
1
2
2
1
2
+ See 380 more…
in vitro differentiated cells
neural progenitor cell
10
5
5
7
15
4
hematopoietic multipotent progenitor cell
1
10
19
1
1
10
1
adipocyte
4
6
4
1
1
6
1
embryonic stem cell
6
1
1
5
1
cardiomyocytes
11
+ See 120 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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