Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
candidate regulatory elements
65
target gene predictions
17
accessible chromatin
5
histone modifications
4
chromatin state
3
eQTL
3
gene expression
3
variant allelic effects
1
binding sites
Date released
101
September, 2022
58
February, 2021
19
November, 2021
6
June, 2020
4
August, 2017
4
February, 2024
4
May, 2021
3
January, 2022
3
March, 2024
2
March, 2020
Available data
198
bed bed3+
bed bed9
11
bigWig
3
tsv
Organism
204
Homo sapiens
Biosample type
181
tissue
cell line
23
primary cell
Organ
857
epithelium
541
kidney
391
connective tissue
334
brain
290
musculature of body
233
pancreas
223
vasculature
204
intestine
200
heart
188
limb
171
blood vessel
168
lung
117
liver
114
skin of body
111
extraembryonic component
111
large intestine
96
stomach
91
eye
78
adipose tissue
71
embryo
65
small intestine
63
artery
59
adrenal gland
55
placenta
51
ureter
44
mammary gland
43
penis
38
esophagus
38
thymus
36
gonad
32
bone element
32
spinal cord
28
spleen
21
nerve
21
prostate gland
19
ovary
19
thyroid gland
17
lymphatic vessel
17
uterus
17
vein
16
testis
15
skeleton
14
bronchus
14
lymphoid tissue
13
bodily fluid
12
blood
12
bone marrow
12
mouth
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
pituitary gland
1
pericardium
Project
185
AMP
19
ENCODE
Genome assembly (visualization)
198
hg19
22
GRCh38
biosample_type!
cell line
organ_slims!
pituitary gland
files.file_type!
bed bed9
BIOSAMPLE
TYPE
204 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
chromatin state
eQTL
gene expression
variant allelic effects
binding sites
tissue
small intestine
29
17
1
1
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
Peyer's patch
7
3
1
+ See 15 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
paneth cell
1
1
+ See 2 more…
See all biosamples
Download