Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
245
gene expression
200
accessible chromatin
120
target gene predictions
99
candidate regulatory elements
89
differential activity
52
chromatin state
39
variant allelic effects
35
binding sites
22
histone modifications
3
eQTL
2
caQTL
Date released
78
November, 2021
26
February, 2024
22
June, 2020
15
November, 2022
11
January, 2020
10
February, 2023
10
January, 2021
8
August, 2021
7
April, 2020
5
October, 2019
5
September, 2022
2
May, 2022
1
May, 2020
Available data
197
bed bed3+
158
bigWig
7
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
200
Homo sapiens
Biosample type
159
primary cell
32
tissue
cell line
9
in vitro differentiated cells
Organ
200
epithelium
82
connective tissue
57
eye
57
pancreas
45
kidney
34
vasculature
33
brain
25
blood vessel
25
musculature of body
23
heart
21
liver
19
limb
17
intestine
11
lung
11
skin of body
10
artery
10
bone element
9
extraembryonic component
8
skeleton
8
stomach
7
adrenal gland
6
adipose tissue
6
embryo
6
large intestine
6
mammary gland
4
esophagus
4
gonad
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
ovary
2
spleen
2
thymus
2
thyroid gland
2
vein
1
blood
1
bodily fluid
1
breast
1
lymphoid tissue
1
mouth
1
nose
1
prostate gland
1
spinal cord
1
testis
1
tongue
1
trachea
1
urinary bladder
Project
105
AMP
78
ENCODE
10
T1D
7
LungMap
Genome assembly (visualization)
199
hg19
113
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
200 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
endothelial cell
15
hepatocyte
8
pancreatic beta cell
8
pancreatic alpha cell
7
endothelial cell of hepatic sinusoid
6
+ See 72 more…
tissue
pigmented layer of retina
20
pancreatic ductal cell
2
breast epithelium
1
endothelial cell
1
esophagus squamous epithelium
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
dermis microvascular lymphatic vessel endothelial cell
1
foreskin keratinocyte
1
mammary gland epithelial cell
1
See all biosamples
Download