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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
152
gene expression
105
accessible chromatin
99
candidate regulatory elements
61
target gene predictions
52
chromatin state
39
variant allelic effects
35
binding sites
27
differential activity
22
histone modifications
3
eQTL
2
caQTL
Date released
182
February, 2021
148
September, 2022
76
February, 2024
36
March, 2023
23
August, 2021
22
June, 2020
19
May, 2021
15
November, 2022
13
January, 2020
13
May, 2020
11
February, 2023
9
February, 2020
6
August, 2018
6
October, 2022
5
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
Available data
362
bed bed3+
160
tsv
79
bigWig
78
txt
49
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
597
Homo sapiens
Biosample type
510
primary cell
61
tissue
cell line
26
in vitro differentiated cells
Organ
597
epithelium
468
kidney
389
brain
353
connective tissue
347
musculature of body
237
limb
236
heart
236
intestine
211
vasculature
205
pancreas
203
lung
173
blood vessel
140
extraembryonic component
134
large intestine
124
skin of body
123
liver
110
stomach
95
eye
86
adipose tissue
86
embryo
80
small intestine
68
placenta
66
artery
64
ureter
63
adrenal gland
49
penis
48
thymus
45
mammary gland
41
esophagus
41
gonad
40
spinal cord
34
spleen
33
bone element
25
nerve
25
prostate gland
21
ovary
21
thyroid gland
21
vein
19
testis
18
lymphoid tissue
18
skeleton
16
uterus
15
mouth
13
bodily fluid
13
breast
13
bronchus
12
blood
10
bone marrow
10
lymphatic vessel
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
597
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
414
hg19
104
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
597 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
variant allelic effects
binding sites
differential activity
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
7
1
2
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
endothelial cell
9
4
2
2
1
1
2
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 86 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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