Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
117
accessible chromatin
50
target gene predictions
43
gene expression
42
candidate regulatory elements
30
differential activity
26
chromatin state
18
eQTL
14
variant allelic effects
8
Fine-mapped variants
8
histone modifications
7
binding sites
2
sQTL
2
variant to gene
Date released
68
September, 2022
45
March, 2023
44
February, 2021
26
February, 2024
24
February, 2023
22
November, 2021
22
November, 2022
20
January, 2021
17
May, 2021
11
March, 2020
10
May, 2020
9
June, 2020
8
August, 2021
7
August, 2018
7
February, 2020
7
January, 2020
6
October, 2019
5
January, 2022
3
August, 2017
2
November, 2019
1
April, 2019
1
January, 2018
1
June, 2021
1
October, 2022
Available data
242
bed bed3+
94
bigWig
75
tsv
22
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
csv
3
xls
Organism
367
Homo sapiens
Biosample type
209
tissue
149
primary cell
cell line
9
in vitro differentiated cells
Organ
906
epithelium
611
kidney
429
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
325
AMP
22
ENCODE
20
T1D
Genome assembly (visualization)
282
hg19
83
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
367 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
retina
23
3
1
6
3
1
1
1
1
tibial nerve
3
3
2
6
4
2
2
3
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
+ See 11 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
See all biosamples
Download