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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1264
candidate regulatory elements
920
target gene predictions
703
chromatin state
679
binding sites
673
histone modifications
360
accessible chromatin
131
gene expression
125
eQTL
Fine-mapped variants
53
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1945
February, 2021
1919
September, 2022
215
June, 2020
194
February, 2024
94
May, 2021
70
October, 2022
66
January, 2022
63
January, 2020
62
May, 2020
55
August, 2021
48
February, 2020
41
March, 2020
29
March, 2024
28
February, 2023
25
August, 2017
17
November, 2022
13
March, 2023
12
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3981
bed bed3+
665
bed bed9
162
tsv
124
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4933
Homo sapiens
Biosample type
2578
tissue
primary cell
2352
cell line
in vitro differentiated cells
4
stem cell
Organ
391
brain
342
kidney
317
musculature of body
277
lung
266
intestine
234
limb
214
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
143
pancreas
121
connective tissue
108
stomach
104
epithelium
101
extraembryonic component
95
skin of body
86
vasculature
83
liver
81
adipose tissue
81
blood vessel
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
gonad
40
artery
38
mammary gland
36
spinal cord
35
esophagus
34
spleen
25
testis
24
lymphoid tissue
22
nerve
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4921
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4702
hg19
1027
GRCh38
4
hg18
biosample_type!
primary cell
in vitro differentiated cells
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
4936 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
21
1
1
5
3
2
stomach
40
21
19
1
3
1
1
kidney
29
14
16
1
2
10
7
1
1
brain
29
16
18
1
3
2
1
2
1
lung
33
17
16
1
1
+ See 261 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
1
H1-hESC
1
39
1
2
1
1
8
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
+ See 765 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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