Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1264
candidate regulatory elements
920
target gene predictions
703
chromatin state
binding sites
673
histone modifications
343
accessible chromatin
131
gene expression
125
eQTL
74
Fine-mapped variants
53
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1919
September, 2022
1336
February, 2021
215
June, 2020
194
February, 2024
112
March, 2020
94
May, 2021
66
January, 2022
63
January, 2020
62
May, 2020
54
August, 2021
48
February, 2020
29
March, 2024
28
February, 2023
25
August, 2017
November, 2022
15
March, 2023
12
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
2
October, 2022
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3285
bed bed3+
665
bed bed9
234
tsv
115
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4311
Homo sapiens
Biosample type
2599
tissue
primary cell
1709
cell line
in vitro differentiated cells
4
stem cell
Organ
413
brain
336
kidney
321
musculature of body
270
lung
260
intestine
241
limb
220
heart
165
bodily fluid
162
large intestine
155
blood
151
embryo
144
pancreas
119
connective tissue
108
stomach
100
extraembryonic component
91
vasculature
88
blood vessel
86
skin of body
85
epithelium
84
adipose tissue
80
liver
80
small intestine
75
uterus
69
bone element
64
ureter
62
adrenal gland
62
placenta
60
eye
60
prostate gland
50
lymph node
47
thymus
45
artery
43
gonad
37
spinal cord
35
esophagus
34
mammary gland
33
spleen
25
nerve
24
lymphoid tissue
22
testis
21
ovary
20
thyroid gland
18
skeleton
16
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
2
vein
1
lymphatic vessel
Project
4299
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4079
hg19
1099
GRCh38
3
hg18
biosample_type!
primary cell
in vitro differentiated cells
annotation_type!
binding sites
month_released!
November, 2022
BIOSAMPLE
TYPE
4314 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
21
1
5
3
2
stomach
40
21
19
1
3
1
1
kidney
29
14
16
2
10
7
1
1
brain
29
16
18
3
2
1
2
1
lung
33
17
16
1
1
+ See 255 more…
cell line
HeLa-S3
5
55
3
A549
21
19
18
1
1
H1-hESC
1
39
1
1
1
8
K562
7
23
7
1
1
MCF-7
9
6
5
2
1
+ See 631 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download