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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1264
candidate regulatory elements
920
target gene predictions
703
chromatin state
679
binding sites
673
histone modifications
accessible chromatin
131
gene expression
125
eQTL
74
Fine-mapped variants
53
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1935
February, 2021
1918
September, 2022
181
February, 2024
113
March, 2020
86
May, 2021
70
October, 2022
66
January, 2022
55
May, 2020
48
August, 2021
48
February, 2020
29
March, 2024
25
August, 2017
22
January, 2020
15
March, 2023
9
May, 2019
8
April, 2019
8
May, 2022
3
February, 2023
3
October, 2019
2
January, 2018
2
November, 2019
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3621
bed bed3+
665
bed bed9
234
tsv
31
bigBed bed9
7
bed bed9+
2
bigWig
1
bam
Organism
4647
Homo sapiens
Biosample type
2455
tissue
2189
cell line
primary cell
in vitro differentiated cells
4
stem cell
Organ
395
brain
316
kidney
313
musculature of body
271
lung
256
intestine
223
limb
203
heart
198
bodily fluid
187
blood
161
large intestine
155
embryo
120
pancreas
113
connective tissue
105
stomach
98
extraembryonic component
93
skin of body
85
vasculature
81
blood vessel
80
adipose tissue
79
liver
79
small intestine
77
uterus
63
prostate gland
62
bone element
62
placenta
61
adrenal gland
60
epithelium
60
ureter
54
lymph node
47
thymus
43
gonad
39
artery
37
mammary gland
37
spinal cord
34
eye
33
esophagus
32
spleen
23
testis
22
lymphoid tissue
22
nerve
20
ovary
19
thyroid gland
17
penis
14
mouth
13
pituitary gland
12
breast
10
skeleton
10
vagina
9
tongue
9
urinary bladder
3
vein
2
lymphatic vessel
Project
4635
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4414
hg19
1006
GRCh38
4
hg18
biosample_type!
primary cell
in vitro differentiated cells
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
4650 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
21
1
1
3
2
stomach
40
21
19
1
1
1
brain
29
16
18
1
3
1
2
1
kidney
29
14
16
1
2
7
1
1
lung
33
17
16
1
1
+ See 238 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
H1-hESC
1
39
1
2
1
8
K562
7
23
7
2
1
MCF-7
9
6
5
3
2
+ See 749 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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