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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1264
candidate regulatory elements
919
target gene predictions
699
chromatin state
679
binding sites
673
histone modifications
319
accessible chromatin
125
eQTL
114
gene expression
74
Fine-mapped variants
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1945
February, 2021
1919
September, 2022
215
June, 2020
194
February, 2024
113
March, 2020
94
May, 2021
68
October, 2022
66
January, 2022
January, 2020
55
August, 2021
48
February, 2020
29
March, 2024
27
February, 2023
25
August, 2017
17
November, 2022
15
March, 2023
12
May, 2020
12
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3897
bed bed3+
661
bed bed9
217
tsv
83
bigWig
27
bigBed bed9
7
bed bed9+
1
bam
Organism
4892
Homo sapiens
Biosample type
2542
tissue
primary cell
2347
cell line
in vitro differentiated cells
4
stem cell
Organ
396
brain
325
kidney
315
musculature of body
277
lung
266
intestine
228
limb
209
bodily fluid
201
heart
198
blood
168
large intestine
163
embryo
140
pancreas
120
connective tissue
108
stomach
101
epithelium
101
extraembryonic component
95
skin of body
85
liver
82
vasculature
80
adipose tissue
80
small intestine
78
eye
78
uterus
77
blood vessel
75
bone element
68
prostate gland
63
placenta
62
adrenal gland
62
lymph node
58
ureter
48
thymus
46
gonad
38
artery
38
mammary gland
38
spinal cord
35
esophagus
34
spleen
25
testis
24
lymphoid tissue
22
nerve
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4880
AMP
9
community
5
ITG
Genome assembly (visualization)
4686
hg19
1055
GRCh38
4
hg18
biosample_type!
primary cell
in vitro differentiated cells
annotation_type!
variant allelic effects
month_released!
January, 2020
BIOSAMPLE
TYPE
4894 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
Fine-mapped variants
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
21
1
1
3
3
stomach
40
21
19
1
3
1
1
kidney
29
14
16
1
2
8
1
7
brain
29
16
17
1
3
1
2
1
lung
33
17
16
1
1
+ See 256 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
1
H1-hESC
1
39
1
2
1
1
8
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
+ See 763 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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