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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1264
candidate regulatory elements
920
target gene predictions
703
chromatin state
679
binding sites
673
histone modifications
360
accessible chromatin
131
gene expression
74
Fine-mapped variants
59
eQTL
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1945
February, 2021
1919
September, 2022
215
June, 2020
194
February, 2024
113
March, 2020
94
May, 2021
68
October, 2022
January, 2022
63
January, 2020
55
August, 2021
48
February, 2020
29
March, 2024
27
February, 2023
25
August, 2017
17
November, 2022
15
March, 2023
12
May, 2020
12
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3939
bed bed3+
665
bed bed9
234
tsv
124
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4889
Homo sapiens
Biosample type
2548
tissue
primary cell
2338
cell line
in vitro differentiated cells
4
stem cell
Organ
400
brain
331
kidney
318
musculature of body
276
lung
263
intestine
233
limb
210
heart
209
bodily fluid
198
blood
166
large intestine
163
embryo
140
pancreas
121
connective tissue
107
stomach
102
epithelium
100
extraembryonic component
92
skin of body
86
vasculature
85
liver
81
adipose tissue
81
blood vessel
79
eye
79
small intestine
77
uterus
75
bone element
67
prostate gland
62
lymph node
62
placenta
61
adrenal gland
61
ureter
48
thymus
44
gonad
39
artery
38
mammary gland
38
spinal cord
33
spleen
32
esophagus
24
lymphoid tissue
24
testis
22
nerve
20
ovary
19
thyroid gland
18
skeleton
17
penis
14
mouth
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
3
vein
2
lymphatic vessel
Project
4877
AMP
9
community
5
ITG
Genome assembly (visualization)
4732
hg19
1033
GRCh38
4
hg18
biosample_type!
primary cell
in vitro differentiated cells
annotation_type!
variant allelic effects
month_released!
January, 2022
BIOSAMPLE
TYPE
4891 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
Fine-mapped variants
eQTL
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
21
1
1
5
3
stomach
40
21
19
1
3
1
kidney
29
14
16
1
2
10
7
1
brain
29
16
18
1
3
2
1
lung
33
17
16
1
+ See 252 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
1
H1-hESC
1
39
1
2
1
1
8
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
+ See 763 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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