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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1246
candidate regulatory elements
907
target gene predictions
687
chromatin state
677
binding sites
670
histone modifications
351
accessible chromatin
125
gene expression
119
eQTL
65
Fine-mapped variants
variant allelic effects
14
differential activity
4
variant to gene
3
pQTL
2
other
2
sQTL
1
caQTL
Date released
1929
February, 2021
1889
September, 2022
214
June, 2020
193
February, 2024
102
March, 2020
93
May, 2021
68
October, 2022
63
January, 2022
56
January, 2020
54
August, 2021
45
February, 2020
28
March, 2024
25
August, 2017
25
February, 2023
17
November, 2022
15
March, 2023
11
May, 2020
9
May, 2022
9
November, 2019
8
April, 2019
8
May, 2019
3
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3893
bed bed3+
649
bed bed9
215
tsv
115
bigWig
25
bigBed bed9
7
bed bed9+
1
bam
Organism
4871
Homo sapiens
Biosample type
2526
tissue
2342
cell line
primary cell
in vitro differentiated cells
4
stem cell
Organ
417
brain
332
kidney
319
musculature of body
277
lung
266
intestine
235
limb
213
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
144
pancreas
124
connective tissue
108
stomach
102
epithelium
101
extraembryonic component
95
skin of body
89
vasculature
86
liver
84
adipose tissue
blood vessel
80
small intestine
79
eye
78
uterus
75
bone element
68
prostate gland
63
placenta
62
adrenal gland
62
lymph node
61
ureter
48
thymus
46
gonad
42
artery
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
testis
24
lymphoid tissue
23
nerve
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4859
AMP
9
community
5
ITG
Genome assembly (visualization)
4659
hg19
1059
GRCh38
4
hg18
biosample_type!
primary cell
in vitro differentiated cells
annotation_type!
variant allelic effects
organ_slims!
blood vessel
BIOSAMPLE
TYPE
4873 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
differential activity
variant to gene
pQTL
other
sQTL
caQTL
tissue
heart
37
20
21
1
1
5
3
stomach
40
21
19
1
3
1
1
kidney
29
14
16
1
2
10
7
1
brain
29
16
18
1
3
2
1
2
lung
33
17
16
1
1
+ See 249 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
1
H1-hESC
1
39
1
2
1
1
8
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
+ See 762 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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