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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
920
target gene predictions
672
chromatin state
638
candidate regulatory elements
350
accessible chromatin
122
eQTL
102
gene expression
74
Fine-mapped variants
70
binding sites
53
variant allelic effects
15
differential activity
5
histone modifications
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
February, 2021
1919
September, 2022
215
June, 2020
194
February, 2024
113
March, 2020
94
May, 2021
70
October, 2022
66
January, 2022
59
January, 2020
59
May, 2020
55
August, 2021
48
February, 2020
29
March, 2024
28
February, 2023
21
August, 2017
17
November, 2022
15
March, 2023
11
November, 2019
9
May, 2022
3
September, 2018
2
January, 2018
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
1
September, 2023
Available data
2068
bed bed3+
665
bed bed9
205
tsv
114
bigWig
bigBed bed9
7
bed bed9+
1
bam
Organism
3031
Homo sapiens
Biosample type
primary cell
1980
tissue
1048
cell line
in vitro differentiated cells
4
stem cell
Organ
316
brain
245
kidney
239
musculature of body
212
lung
196
intestine
181
limb
171
heart
143
bodily fluid
136
blood
124
embryo
122
large intestine
122
pancreas
84
connective tissue
79
stomach
78
epithelium
77
extraembryonic component
70
uterus
69
vasculature
68
blood vessel
68
eye
67
liver
63
adipose tissue
62
small intestine
60
skin of body
48
adrenal gland
48
placenta
46
ureter
45
bone element
41
prostate gland
37
artery
37
thymus
35
lymph node
34
gonad
31
spinal cord
26
esophagus
24
mammary gland
24
spleen
21
nerve
19
lymphoid tissue
17
ovary
17
testis
16
thyroid gland
12
mouth
12
penis
12
pituitary gland
10
breast
9
skeleton
9
urinary bladder
8
tongue
8
vagina
1
vein
Project
3019
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
2827
hg19
1062
GRCh38
4
hg18
biosample_type!
primary cell
in vitro differentiated cells
files.file_type!
bigBed bed9
month_released!
February, 2021
BIOSAMPLE
TYPE
3034 results
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Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
eQTL
gene expression
Fine-mapped variants
binding sites
variant allelic effects
differential activity
histone modifications
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
20
19
19
5
2
2
stomach
21
19
19
3
1
1
brain
16
16
16
2
2
1
1
kidney
14
14
14
10
1
1
lung
17
16
16
1
1
+ See 189 more…
cell line
HeLa-S3
55
3
3
1
A549
19
18
18
1
1
H1-hESC
39
1
1
1
8
1
K562
23
7
6
1
1
EndoC_BH1
1
8
8
1
3
+ See 268 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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