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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
accessible chromatin
24
candidate regulatory elements
21
gene expression
20
target gene predictions
15
chromatin state
15
eQTL
5
Fine-mapped variants
4
binding sites
4
variant allelic effects
3
differential activity
3
histone modifications
2
sQTL
2
variant to gene
Date released
40
September, 2022
24
February, 2021
21
May, 2021
10
February, 2024
9
March, 2020
8
August, 2021
8
March, 2023
6
May, 2020
4
January, 2020
4
January, 2022
3
June, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
August, 2017
1
February, 2023
1
January, 2018
1
October, 2019
Available data
89
bed bed3+
26
tsv
17
bigWig
13
bed bed9
bigBed bed9
Organism
146
Homo sapiens
Biosample type
primary cell
112
tissue
34
cell line
in vitro differentiated cells
Organ
421
brain
340
kidney
321
musculature of body
277
lung
266
intestine
239
limb
213
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
146
pancreas
126
connective tissue
108
stomach
104
epithelium
101
extraembryonic component
95
skin of body
89
vasculature
86
adipose tissue
85
liver
84
blood vessel
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
gonad
44
artery
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
testis
24
lymphoid tissue
24
nerve
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
144
AMP
2
community
Genome assembly (visualization)
112
hg19
38
GRCh38
biosample_type!
primary cell
in vitro differentiated cells
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
146 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
eQTL
Fine-mapped variants
binding sites
variant allelic effects
differential activity
histone modifications
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
2
13
2
2
1
1
2
2
body of pancreas
8
2
5
4
1
3
1
pancreas
5
5
5
2
1
1
1
1
endocrine pancreas
7
4
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
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