Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1195
candidate regulatory elements
879
target gene predictions
673
binding sites
668
histone modifications
667
chromatin state
353
accessible chromatin
129
gene expression
123
eQTL
74
Fine-mapped variants
53
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1899
February, 2021
1821
September, 2022
208
June, 2020
191
February, 2024
112
March, 2020
89
May, 2021
69
October, 2022
64
January, 2022
63
January, 2020
62
May, 2020
55
August, 2021
48
February, 2020
28
February, 2023
27
March, 2024
22
August, 2017
17
November, 2022
15
March, 2023
12
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3850
bed bed3+
632
bed bed9
232
tsv
124
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4839
Homo sapiens
Biosample type
2518
tissue
primary cell
2318
cell line
in vitro differentiated cells
4
stem cell
Organ
427
brain
342
kidney
323
musculature of body
277
lung
266
intestine
243
limb
223
heart
209
bodily fluid
198
blood
large intestine
163
embryo
148
pancreas
127
connective tissue
108
stomach
104
epithelium
101
extraembryonic component
95
skin of body
95
vasculature
90
blood vessel
87
adipose tissue
86
liver
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4827
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4610
hg19
1062
GRCh38
4
hg18
biosample_type!
primary cell
in vitro differentiated cells
organ_slims!
large intestine
BIOSAMPLE
TYPE
4842 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
chromatin state
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
1
1
21
5
3
2
stomach
40
21
1
19
3
1
1
kidney
29
14
1
2
16
10
7
1
1
brain
29
16
1
3
18
2
1
2
1
lung
33
17
16
1
1
+ See 249 more…
cell line
HeLa-S3
5
55
1
3
A549
21
19
2
1
18
1
H1-hESC
1
39
2
1
1
1
8
K562
7
23
2
1
7
1
MCF-7
9
6
3
2
5
1
+ See 758 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download