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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
90
candidate regulatory elements
58
target gene predictions
51
chromatin state
14
accessible chromatin
14
histone modifications
12
binding sites
10
eQTL
7
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
138
September, 2022
65
February, 2021
10
June, 2020
7
August, 2021
7
February, 2024
7
March, 2020
7
May, 2021
6
August, 2017
3
January, 2022
2
February, 2020
2
March, 2024
2
May, 2022
2
October, 2022
1
January, 2020
1
November, 2019
1
September, 2018
Available data
194
bed bed3+
45
bed bed9
12
tsv
3
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
261
Homo sapiens
Biosample type
192
tissue
primary cell
62
cell line
7
in vitro differentiated cells
Organ
431
brain
343
kidney
325
musculature of body
277
lung
266
intestine
243
limb
224
heart
209
bodily fluid
198
blood
193
embryo
177
connective tissue
168
large intestine
151
pancreas
130
epithelium
108
stomach
106
extraembryonic component
104
skin of body
97
vasculature
93
liver
90
blood vessel
88
adipose tissue
86
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
41
mammary gland
39
spinal cord
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
penis
21
ovary
20
thyroid gland
18
skeleton
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
4
lymphatic vessel
4
nose
3
vein
Project
261
AMP
Genome assembly (visualization)
248
hg19
61
GRCh38
2
hg18
biosample_type!
primary cell
BIOSAMPLE
TYPE
261 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
Fine-mapped variants
caQTL
differential activity
tissue
large intestine
27
14
13
1
1
liver
13
10
9
4
2
1
7
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 9 more…
cell line
HepG2
2
3
2
2
5
3
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HuH-7
1
1
1
1
1
1
+ See 7 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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