Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
22
gene expression
20
accessible chromatin
12
binding sites
12
histone modifications
10
target gene predictions
8
candidate regulatory elements
chromatin state
4
variant allelic effects
3
differential activity
Date released
28
February, 2024
16
February, 2021
16
September, 2022
5
March, 2020
5
November, 2021
4
August, 2021
4
June, 2020
4
March, 2023
3
May, 2020
2
January, 2020
2
May, 2021
1
July, 2020
1
October, 2022
Available data
65
bed bed3+
21
bigWig
21
tsv
3
csv
Organism
91
Homo sapiens
Biosample type
61
primary cell
tissue
24
cell line
6
in vitro differentiated cells
Organ
839
epithelium
335
kidney
325
connective tissue
187
bodily fluid
179
blood
165
vasculature
160
pancreas
159
embryo
147
skin of body
108
blood vessel
102
brain
102
lung
91
liver
70
mammary gland
67
uterus
63
musculature of body
55
bone element
54
lymph node
53
intestine
52
penis
52
prostate gland
38
extraembryonic component
38
heart
36
large intestine
35
eye
31
artery
19
lymphatic vessel
17
vein
14
bronchus
11
adrenal gland
11
bone marrow
11
placenta
11
stomach
10
gonad
10
pituitary gland
9
esophagus
7
limb
7
testis
6
mouth
6
spinal cord
5
adipose tissue
5
lymphoid tissue
5
trachea
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
86
AMP
5
ENCODE
Genome assembly (visualization)
64
hg19
39
GRCh38
1
hg18
biosample_type!
tissue
annotation_type!
chromatin state
BIOSAMPLE
TYPE
91 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
binding sites
histone modifications
target gene predictions
candidate regulatory elements
variant allelic effects
differential activity
primary cell
hepatocyte
13
8
1
4
3
1
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
3
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
5
3
2
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
1
2
hepatocyte(AFP)
3
Download