Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
19
accessible chromatin
11
candidate regulatory elements
target gene predictions
6
binding sites
6
chromatin state
6
gene expression
4
histone modifications
3
variant allelic effects
2
caQTL
2
eQTL
Date released
15
February, 2021
14
February, 2024
10
September, 2022
8
November, 2021
3
May, 2022
3
October, 2022
2
June, 2020
1
February, 2020
1
January, 2020
1
May, 2020
1
October, 2019
Available data
47
bed bed3+
12
bigWig
6
bed bed9
1
bigBed bed9
Organism
59
Homo sapiens
Biosample type
tissue
45
primary cell
13
cell line
1
in vitro differentiated cells
Organ
771
epithelium
335
kidney
297
connective tissue
164
vasculature
157
bodily fluid
149
blood
138
skin of body
134
pancreas
108
blood vessel
104
embryo
96
lung
88
brain
88
liver
66
mammary gland
59
musculature of body
54
bone element
53
lymph node
51
penis
50
prostate gland
41
intestine
36
extraembryonic component
35
eye
33
heart
30
artery
29
large intestine
18
lymphatic vessel
18
vein
14
uterus
13
bronchus
11
placenta
10
bone marrow
9
gonad
7
adrenal gland
7
esophagus
7
stomach
7
testis
6
limb
6
mouth
6
spinal cord
5
trachea
4
adipose tissue
4
lymphoid tissue
3
nose
2
small intestine
2
thyroid gland
1
ovary
1
pericardium
1
thymus
Project
51
AMP
8
ENCODE
Genome assembly (visualization)
58
hg19
15
GRCh38
biosample_type!
tissue
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
59 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
binding sites
chromatin state
gene expression
histone modifications
variant allelic effects
caQTL
eQTL
primary cell
skeletal muscle satellite cell
5
2
2
2
skeletal muscle fiber
5
2
2
type I muscle cell
3
1
1
1
type II muscle cell
3
1
1
1
skeletal muscle cell
1
2
1
1
+ See 4 more…
cell line
LHCN-M2
1
2
1
1
1
SJCRH30
1
2
1
A673
2
1
in vitro differentiated cells
myotube
1
See all biosamples
Download