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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
552
gene expression
547
accessible chromatin
429
target gene predictions
392
candidate regulatory elements
302
histone modifications
233
chromatin state
152
differential activity
136
binding sites
88
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
636
February, 2021
565
September, 2022
330
November, 2021
293
May, 2021
286
September, 2023
184
February, 2024
93
May, 2020
73
August, 2021
71
June, 2020
56
January, 2021
55
March, 2023
40
January, 2022
40
May, 2022
30
October, 2022
27
November, 2022
26
January, 2020
19
April, 2020
17
March, 2020
16
February, 2020
11
August, 2017
9
August, 2018
9
October, 2019
5
February, 2023
3
November, 2019
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1912
bed bed3+
664
tsv
419
bigWig
195
bed bed9
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2854
Homo sapiens
Biosample type
tissue
2429
primary cell
cell line
465
in vitro differentiated cells
4
stem cell
Organ
845
epithelium
332
connective tissue
310
kidney
171
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
53
embryo
52
musculature of body
49
mammary gland
47
penis
extraembryonic component
40
brain
34
lung
32
heart
29
artery
29
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
2210
AMP
330
ENCODE
281
KPMP
60
T1D
19
LungMap
Genome assembly (visualization)
2151
hg19
760
GRCh38
biosample_type!
tissue
cell line
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
2900 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 438 more…
in vitro differentiated cells
neural progenitor cell
7
10
5
5
15
4
hematopoietic multipotent progenitor cell
1
1
10
19
1
10
1
adipocyte
1
4
6
4
1
6
1
embryonic stem cell
6
1
1
5
1
cardiomyocytes
11
+ See 120 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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