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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
887
histone modifications
839
target gene predictions
781
binding sites
734
candidate regulatory elements
706
accessible chromatin
87
variant allelic effects
16
chromatin state
11
caQTL
5
eQTL
3
hQTL
2
meQTL
2
other
Date released
1799
February, 2021
760
September, 2022
333
November, 2021
272
February, 2024
256
May, 2021
225
June, 2020
101
October, 2022
90
May, 2020
56
January, 2021
40
August, 2021
25
January, 2020
24
November, 2022
19
April, 2020
16
August, 2017
15
March, 2020
13
May, 2022
7
October, 2019
5
February, 2023
5
January, 2022
5
September, 2023
4
November, 2019
2
November, 2020
1
June, 2021
Available data
4073
bed bed3+
686
tsv
426
bigWig
383
bed bed9
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
4027
Homo sapiens
Biosample type
2125
cell line
tissue
1595
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
493
epithelium
281
connective tissue
189
bodily fluid
181
blood
150
embryo
148
skin of body
116
vasculature
103
lung
101
brain
90
pancreas
84
kidney
76
blood vessel
71
mammary gland
67
uterus
66
liver
57
musculature of body
55
bone element
54
lymph node
53
intestine
52
penis
52
prostate gland
38
extraembryonic component
36
large intestine
35
eye
32
heart
23
artery
17
vein
14
bronchus
14
lymphatic vessel
11
adrenal gland
11
bone marrow
11
placenta
11
stomach
10
pituitary gland
9
esophagus
9
gonad
7
limb
6
mouth
6
spinal cord
6
testis
5
lymphoid tissue
5
trachea
4
adipose tissue
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
thymus
Project
3661
AMP
333
ENCODE
60
T1D
19
LungMap
Genome assembly (visualization)
4066
hg19
705
GRCh38
1
hg18
biosample_type!
tissue
BIOSAMPLE
TYPE
4073 results
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Clear Filters
histone modifications
target gene predictions
binding sites
candidate regulatory elements
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
cell line
HeLa-S3
55
1
5
A549
1
19
2
21
1
H1-hESC
1
39
2
1
1
K562
1
23
2
7
1
1
MCF-7
2
6
3
9
1
+ See 760 more…
primary cell
monocyte
86
2
1
18
1
1
CD8-positive, alpha-beta T cell
30
5
7
4
common myeloid progenitor, CD34-positive
14
27
B cell
10
14
6
endothelial cell
1
7
2
15
2
2
1
+ See 329 more…
in vitro differentiated cells
neural progenitor cell
14
5
5
10
hematopoietic multipotent progenitor cell
1
10
1
19
1
adipocyte
1
6
1
4
4
4
mesenchymal stem cell
1
3
1
3
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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