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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
863
histone modifications
781
target gene predictions
736
binding sites
692
accessible chromatin
689
candidate regulatory elements
85
variant allelic effects
14
chromatin state
11
caQTL
5
eQTL
3
hQTL
2
meQTL
2
other
Date released
1728
February, 2021
712
September, 2022
329
November, 2021
252
May, 2021
242
February, 2024
213
June, 2020
90
May, 2020
82
October, 2022
56
January, 2021
40
August, 2021
25
January, 2020
24
November, 2022
19
April, 2020
15
March, 2020
14
August, 2017
13
May, 2022
7
October, 2019
5
February, 2023
5
January, 2022
5
September, 2023
4
November, 2019
2
November, 2020
1
June, 2021
Available data
3883
bed bed3+
688
tsv
424
bigWig
359
bed bed9
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
3837
Homo sapiens
Biosample type
1953
cell line
tissue
1577
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
493
epithelium
281
connective tissue
189
bodily fluid
blood
150
embryo
148
skin of body
116
vasculature
103
lung
101
brain
90
pancreas
84
kidney
76
blood vessel
71
mammary gland
67
uterus
66
liver
57
musculature of body
55
bone element
54
lymph node
53
intestine
52
penis
52
prostate gland
38
extraembryonic component
36
large intestine
35
eye
32
heart
23
artery
17
vein
14
bronchus
14
lymphatic vessel
11
adrenal gland
11
bone marrow
11
placenta
11
stomach
10
pituitary gland
esophagus
9
gonad
7
limb
6
mouth
6
spinal cord
6
testis
5
lymphoid tissue
5
trachea
4
adipose tissue
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
thymus
Project
3475
AMP
329
ENCODE
60
T1D
19
LungMap
Genome assembly (visualization)
3876
hg19
673
GRCh38
1
hg18
biosample_type!
tissue
organ_slims!
blood
esophagus
BIOSAMPLE
TYPE
3883 results
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Clear Filters
histone modifications
target gene predictions
binding sites
accessible chromatin
candidate regulatory elements
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
cell line
HeLa-S3
55
1
5
A549
1
19
2
1
21
H1-hESC
1
39
2
1
1
MCF-7
2
6
3
1
9
breast cancer cell
11
9
+ See 734 more…
primary cell
monocyte
86
2
1
18
1
1
CD8-positive, alpha-beta T cell
30
5
4
7
common myeloid progenitor, CD34-positive
14
27
B cell
10
6
14
endothelial cell
1
7
2
15
2
2
1
+ See 325 more…
in vitro differentiated cells
neural progenitor cell
14
5
10
5
hematopoietic multipotent progenitor cell
1
10
1
1
19
adipocyte
1
6
1
4
4
4
mesenchymal stem cell
1
3
1
1
3
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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