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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
target gene predictions
26
candidate regulatory elements
21
accessible chromatin
14
chromatin state
7
binding sites
6
histone modifications
3
variant allelic effects
Date released
42
September, 2022
23
February, 2021
22
November, 2021
7
June, 2020
5
February, 2024
4
May, 2021
2
October, 2022
Available data
91
bed bed3+
14
bed bed9
14
bigWig
Organism
105
Homo sapiens
Biosample type
tissue
63
primary cell
37
cell line
5
in vitro differentiated cells
Organ
888
epithelium
363
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
83
AMP
22
ENCODE
Genome assembly (visualization)
105
hg19
38
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
105 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
histone modifications
variant allelic effects
primary cell
trophoblast cell
5
7
1
4
1
fibroblast of villous mesenchyme
1
2
1
1
2
1
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
+ See 12 more…
cell line
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
HCT116
3
2
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 4 more…
in vitro differentiated cells
trophoblast cell
2
2
1
See all biosamples
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