Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
71
candidate regulatory elements
45
target gene predictions
38
chromatin state
16
accessible chromatin
14
binding sites
7
histone modifications
1
variant allelic effects
Date released
111
September, 2022
49
February, 2021
9
November, 2021
7
June, 2020
6
October, 2022
5
May, 2021
3
April, 2020
1
August, 2017
1
February, 2024
Available data
155
bed bed3+
37
bed bed9
9
bigWig
Organism
192
Homo sapiens
Biosample type
tissue
111
cell line
75
primary cell
6
in vitro differentiated cells
Organ
888
epithelium
363
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
180
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
192
hg19
46
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
192 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
variant allelic effects
cell line
A549
21
19
18
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
EH
2
1
1
+ See 7 more…
primary cell
foreskin keratinocyte
11
4
4
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
type II pneumocyte
2
4
1
foreskin melanocyte
4
1
1
+ See 4 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
See all biosamples
Download