Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
794
histone modifications
771
target gene predictions
743
binding sites
655
candidate regulatory elements
647
accessible chromatin
499
gene expression
chromatin state
162
differential activity
85
variant allelic effects
54
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1760
February, 2021
690
September, 2022
333
November, 2021
320
February, 2024
319
May, 2021
281
September, 2023
205
June, 2020
101
October, 2022
88
May, 2020
64
March, 2023
56
January, 2021
51
August, 2021
47
January, 2022
22
January, 2020
19
April, 2020
16
February, 2020
13
May, 2022
12
March, 2020
9
August, 2018
9
November, 2022
5
February, 2023
5
October, 2019
3
November, 2020
2
March, 2024
1
July, 2020
1
June, 2021
1
November, 2019
Available data
3709
bed bed3+
611
tsv
414
bigWig
108
txt
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
4388
Homo sapiens
Biosample type
2272
primary cell
2161
cell line
2141
tissue
426
in vitro differentiated cells
3
stem cell
Organ
814
epithelium
334
kidney
282
connective tissue
187
bodily fluid
179
blood
163
vasculature
157
pancreas
138
skin of body
135
embryo
108
blood vessel
102
lung
97
brain
85
liver
67
mammary gland
67
uterus
61
musculature of body
55
bone element
54
lymph node
53
intestine
52
prostate gland
46
penis
37
heart
36
large intestine
34
extraembryonic component
31
artery
29
eye
17
lymphatic vessel
17
vein
14
bronchus
11
adrenal gland
11
bone marrow
11
placenta
11
stomach
10
gonad
10
pituitary gland
9
esophagus
7
limb
7
testis
6
mouth
6
spinal cord
5
lymphoid tissue
5
trachea
4
adipose tissue
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
3732
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
9
community
Genome assembly (visualization)
3725
hg19
729
GRCh38
1
hg18
annotation_type!
chromatin state
BIOSAMPLE
TYPE
4433 results
search-icon
table-tab-icon
Clear Filters
histone modifications
target gene predictions
binding sites
candidate regulatory elements
accessible chromatin
gene expression
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
86
2
1
18
15
4
2
1
1
CD8-positive, alpha-beta T cell
30
5
7
4
3
common myeloid progenitor, CD34-positive
14
27
endothelial cell
1
7
2
15
9
2
1
2
B cell
10
14
6
2
+ See 444 more…
cell line
HeLa-S3
55
1
5
H1-hESC
1
39
2
1
1
8
A549
1
19
2
21
1
K562
1
23
2
7
1
EndoC_BH1
1
1
1
8
8
3
1
+ See 764 more…
See all biosamples
Download