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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
737
binding sites
702
histone modifications
655
candidate regulatory elements
490
gene expression
486
target gene predictions
361
accessible chromatin
162
differential activity
85
variant allelic effects
45
chromatin state
9
eQTL
5
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1757
February, 2021
685
September, 2022
281
September, 2023
222
May, 2021
205
June, 2020
121
February, 2024
99
October, 2022
87
May, 2020
64
March, 2023
56
January, 2021
48
August, 2021
41
May, 2022
19
April, 2020
16
February, 2020
12
March, 2020
11
August, 2017
9
August, 2018
9
November, 2022
2
March, 2024
1
February, 2023
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2020
Available data
3045
bed bed3+
602
tsv
130
bigWig
108
txt
34
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
3704
Homo sapiens
Biosample type
1987
cell line
1918
tissue
1762
primary cell
405
in vitro differentiated cells
4
stem cell
Organ
641
epithelium
323
kidney
219
connective tissue
161
bodily fluid
153
blood
133
pancreas
132
vasculature
129
skin of body
94
lung
89
brain
85
blood vessel
82
embryo
62
mammary gland
55
bone element
54
lymph node
52
prostate gland
49
musculature of body
47
liver
46
penis
32
intestine
31
extraembryonic component
28
artery
28
large intestine
25
heart
24
eye
17
vein
14
lymphatic vessel
14
uterus
12
bronchus
11
bone marrow
10
pituitary gland
9
placenta
7
gonad
7
limb
6
mouth
6
spinal cord
6
testis
5
esophagus
5
trachea
4
adipose tissue
4
lymphoid tissue
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
3384
AMP
281
KPMP
56
T1D
19
LungMap
9
community
Genome assembly (visualization)
4113
hg19
GRCh38
1
hg18
assembly!
GRCh38
BIOSAMPLE
TYPE
3749 results
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Clear Filters
binding sites
histone modifications
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
sQTL
other
cell line
A549
2
1
21
19
1
EndoC_BH1
1
1
8
1
7
3
1
MCF-7
3
2
9
6
1
breast cancer cell
9
11
K562
2
1
7
7
1
1
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primary cell
CD8-positive, alpha-beta T cell
30
7
3
4
3
1
common myeloid progenitor, CD34-positive
27
14
monocyte
1
2
15
2
5
1
2
1
1
B cell
14
2
10
3
CD14-positive monocyte
8
19
+ See 384 more…
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