Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
640
binding sites
581
histone modifications
387
target gene predictions
309
candidate regulatory elements
181
chromatin state
150
accessible chromatin
10
eQTL
10
gene expression
7
differential activity
2
variant allelic effects
Date released
1291
February, 2021
512
September, 2022
168
February, 2024
148
June, 2020
69
October, 2022
47
May, 2021
10
January, 2022
9
August, 2021
7
March, 2023
7
May, 2022
5
August, 2017
3
March, 2020
1
March, 2024
Available data
2074
bed bed3+
169
bed bed9
10
tsv
7
bed bed9+
2
bigWig
Organism
2277
Homo sapiens
Biosample type
2277
cell line
2237
tissue
2034
primary cell
466
in vitro differentiated cells
4
stem cell
Organ
205
bodily fluid
195
blood
127
embryo
96
lung
77
brain
70
skin of body
65
uterus
62
lymph node
53
bone element
53
prostate gland
43
epithelium
kidney
36
mammary gland
34
intestine
34
large intestine
pancreas
31
connective tissue
28
liver
17
musculature of body
15
penis
11
vasculature
10
eye
10
pituitary gland
9
heart
7
gonad
7
limb
7
testis
6
blood vessel
6
lymphoid tissue
4
artery
4
mouth
3
adipose tissue
3
extraembryonic component
3
placenta
3
spinal cord
2
lymphatic vessel
2
vein
Project
2270
AMP
7
community
Genome assembly (visualization)
2249
hg19
353
GRCh38
1
hg18
organ_slims!
pancreas
kidney
BIOSAMPLE
TYPE
2277 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
eQTL
gene expression
differential activity
variant allelic effects
cell line
HeLa-S3
1
55
5
3
A549
2
1
19
21
18
1
H1-hESC
2
1
39
1
1
1
8
K562
2
1
23
7
7
1
MCF-7
3
2
6
9
5
1
+ See 748 more…
See all biosamples
Download