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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
179
candidate regulatory elements
179
target gene predictions
5
histone modifications
Date released
1303
February, 2021
363
September, 2022
168
February, 2024
152
June, 2020
70
October, 2022
55
May, 2021
5
August, 2017
4
March, 2020
2
May, 2020
1
August, 2021
1
January, 2020
1
November, 2019
Available data
363
bed bed3+
179
bed bed9
Organism
363
Homo sapiens
Biosample type
918
tissue
363
cell line
327
primary cell
70
in vitro differentiated cells
Organ
50
bodily fluid
46
blood
46
lung
28
skin of body
22
brain
20
bone element
20
embryo
18
prostate gland
16
lymph node
14
kidney
14
mammary gland
10
liver
8
intestine
8
large intestine
8
penis
6
connective tissue
6
musculature of body
6
pancreas
6
uterus
2
epithelium
2
extraembryonic component
2
eye
2
gonad
2
limb
2
lymphoid tissue
2
mouth
2
placenta
2
testis
Project
363
AMP
Genome assembly (visualization)
363
hg19
4
GRCh38
BIOSAMPLE
TYPE
363 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
cell line
A549
18
18
K562
6
6
MCF-7
5
5
HeLa-S3
3
3
HepG2
1
1
4
endometrium adenocarcinoma
3
3
immortal human breast epithelial cell line cell
3
3
22Rv1
2
2
LNCaP clone FGC
2
2
NAMALWA cell
2
2
SK-N-DZ
2
2
SK-N-SH
2
2
T47D
2
2
8988T
1
1
A172
1
1
A673
1
1
ACC112
1
1
ACHN
1
1
AG04449 cell
1
1
AG04450 cell
1
1
AG08395 cell
1
1
AG08396 cell
1
1
AG09309 cell
1
1
AG09319 cell
1
1
AG10803 cell
1
1
AG20443
1
1
BE(2)-C
1
1
BJ cell
1
1
C4-2B
1
1
CMK
1
1
COLO829
1
1
CWRU1
1
1
Caco-2 cell
1
1
Caki2
1
1
DND-41
1
1
DOHH2
1
1
Daoy
1
1
EH
1
1
EL
1
1
ELF-1
1
1
ELR
1
1
ES-I3
1
1
G401
1
1
GM03348
1
1
GM04503
1
1
GM04504
1
1
GM06990
1
1
GM08714
1
1
GM10248
1
1
GM10266
1
1
GM12864
1
1
GM12865
1
1
GM12875
1
1
GM12878
1
1
GM12891
1
1
GM12892
1
1
GM18507
1
1
GM19238
1
1
GM19239
1
1
GM19240
1
1
GM23248
1
1
GM23338
1
1
H1-hESC
1
1
H4
1
1
H54
1
1
H7-hESC
1
1
H9
1
1
HAP-1
1
1
HCT116
1
1
HEK293
1
1
HEK293T
1
1
HK-2 cell
1
1
HL-60
1
1
HPDE6-E6E7
1
1
HS-27A
1
1
HS-5
1
1
HT-29
1
1
HT1080
1
1
HTR-8/Svneo
1
1
HUES48
1
1
HUES6
1
1
HUES64
1
1
HuH-7
1
1
HuH-7.5
1
1
IMR-90
1
1
KARPAS-422 cell
1
1
KBM-7
1
1
KMS-11
1
1
KOPT-K1
1
1
L1-S8
1
1
L1-S8R
1
1
LHCN-M2
1
1
LoVo cell
1
1
Loucy
1
1
M059J
1
1
MG63
1
1
MM.1S
1
1
NB4
1
1
NCI-H226 cell
1
1
NCI-H460 cell
1
1
NCI-H929
1
1
NT2-D1 cell
1
1
OCI-LY1
1
1
OCI-LY3
1
1
OCI-LY7
1
1
PC-3
1
1
PC-9
1
1
Panc1
1
1
RCC 7860
1
1
RPMI7951
1
1
RPMI8226
1
1
RWPE1
1
1
RWPE2
1
1
SJCRH30
1
1
SJSA1
1
1
SK-MEL-5
1
1
SK-N-MC
1
1
SU-DHL-6
1
1
SW480
1
1
UCSF-4
1
1
VCaP cell
1
1
WERI-Rb-1
1
1
WI38
1
1
colon carcinoma
1
1
colon epithelial cell
1
1
foreskin fibroblast
1
1
iPS DF 19.11
1
1
iPS DF 19.7
1
1
iPS DF 4.7 Cell Line
1
1
iPS DF 6.9
1
1
iPS-11a
1
1
iPS-15b
1
1
iPS-18a
1
1
iPS-18c
1
1
iPS-20b
1
1
iPS-NIHi11
1
1
iPS-NIHi7
1
1
lymphocyte
1
1
medulloblastoma
1
1
renal cell carcinoma
1
1
urothelium cell line
1
1
leukemic stem cell
1
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