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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
553
accessible chromatin
gene expression
437
target gene predictions
407
candidate regulatory elements
histone modifications
241
chromatin state
152
differential activity
138
binding sites
87
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
591
September, 2022
333
November, 2021
325
February, 2021
114
September, 2023
110
February, 2024
101
May, 2021
93
May, 2020
74
June, 2020
56
January, 2021
42
March, 2023
40
January, 2022
40
May, 2022
31
October, 2022
27
November, 2022
26
January, 2020
24
August, 2021
19
April, 2020
10
August, 2017
9
March, 2020
9
October, 2019
4
February, 2023
2
May, 2024
2
November, 2019
2
November, 2020
1
June, 2021
Available data
1639
bed bed3+
413
bigWig
204
bed bed9
155
tsv
27
bed bed9+
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2040
Homo sapiens
Biosample type
2453
tissue
1783
primary cell
1747
cell line
302
in vitro differentiated cells
4
stem cell
Organ
583
epithelium
284
connective tissue
138
vasculature
121
kidney
103
skin of body
99
pancreas
92
blood vessel
47
embryo
47
mammary gland
43
extraembryonic component
43
liver
43
musculature of body
43
penis
38
brain
34
lung
28
eye
26
heart
22
intestine
21
artery
20
vein
16
lymphatic vessel
15
bronchus
11
adrenal gland
11
bone element
11
bone marrow
11
stomach
10
esophagus
10
prostate gland
9
placenta
7
blood
7
bodily fluid
6
large intestine
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
4
uterus
3
thyroid gland
3
trachea
2
ovary
1
adipose tissue
1
limb
1
testis
1
thymus
Project
1562
AMP
333
ENCODE
110
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1875
hg19
662
GRCh38
annotation_type!
histone modifications
gene expression
BIOSAMPLE
TYPE
2085 results
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accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
common myeloid progenitor, CD34-positive
14
27
13
B cell
6
10
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
CD14-positive monocyte
19
8
4
endothelial cell
15
7
2
2
1
2
+ See 379 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
1
10
19
10
1
neural progenitor cell
10
5
5
4
adipocyte
4
6
4
6
1
embryonic stem cell
6
1
5
1
mesenchymal stem cell
1
3
3
2
1
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