Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
681
binding sites
histone modifications
464
target gene predictions
406
candidate regulatory elements
235
chromatin state
232
accessible chromatin
95
gene expression
10
differential activity
10
eQTL
10
variant allelic effects
1
representative DNase hypersensitivity sites
Date released
834
February, 2021
642
September, 2022
200
February, 2024
173
June, 2020
102
May, 2021
70
October, 2022
26
August, 2021
18
November, 2022
17
March, 2020
13
January, 2022
9
August, 2017
9
March, 2023
9
May, 2020
7
May, 2022
4
January, 2020
4
September, 2023
3
November, 2019
2
October, 2019
1
February, 2023
1
March, 2024
Available data
1795
bed bed3+
219
bed bed9
97
tsv
24
csv
16
bigWig
7
bed bed9+
5
bigBed bed9
Organism
2144
Homo sapiens
Biosample type
2563
tissue
2259
primary cell
1768
cell line
376
in vitro differentiated cells
4
stem cell
Organ
182
bodily fluid
173
blood
150
embryo
93
lung
76
brain
72
skin of body
69
connective tissue
65
uterus
61
epithelium
58
lymph node
50
bone element
48
prostate gland
40
kidney
36
mammary gland
36
pancreas
31
intestine
31
large intestine
28
liver
19
penis
18
musculature of body
15
eye
10
pituitary gland
9
vasculature
8
extraembryonic component
7
gonad
7
heart
7
testis
6
limb
5
lymphoid tissue
4
blood vessel
4
mouth
4
nose
3
adipose tissue
3
artery
3
lymphatic vessel
3
placenta
3
spinal cord
1
vein
Project
2135
AMP
9
community
Genome assembly (visualization)
2020
hg19
413
GRCh38
1
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
2144 results
search-icon
table-tab-icon
Clear Filters
binding sites
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
representative DNase hypersensitivity sites
cell line
HeLa-S3
1
55
5
3
A549
2
19
21
18
1
H1-hESC
2
39
1
1
1
8
K562
2
23
7
7
1
MCF-7
3
6
9
5
1
+ See 645 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
1
10
19
10
1
1
neural progenitor cell
5
5
4
10
7
adipocyte
1
6
4
6
4
1
embryonic stem cell
1
1
5
6
cardiomyocytes
11
+ See 97 more…
See all biosamples
Download