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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1010
candidate regulatory elements
580
target gene predictions
551
chromatin state
263
accessible chromatin
183
histone modifications
182
gene expression
113
eQTL
74
binding sites
71
Fine-mapped variants
52
variant allelic effects
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1473
September, 2022
827
February, 2021
111
March, 2020
83
June, 2020
77
August, 2021
70
May, 2021
64
January, 2020
64
May, 2020
58
February, 2024
58
January, 2022
45
February, 2020
35
November, 2022
28
March, 2024
26
February, 2023
23
August, 2017
11
November, 2019
9
May, 2019
8
April, 2019
7
October, 2019
6
March, 2023
4
September, 2023
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
2183
bed bed3+
522
bed bed9
281
tsv
130
bigWig
35
bigBed bed9
24
csv
1
bam
Organism
3095
Homo sapiens
Biosample type
2627
tissue
2469
primary cell
2352
cell line
470
in vitro differentiated cells
4
stem cell
Organ
353
brain
308
musculature of body
302
kidney
236
limb
232
intestine
215
heart
181
lung
145
connective tissue
134
large intestine
117
pancreas
108
stomach
103
extraembryonic component
87
epithelium
86
vasculature
85
adipose tissue
84
blood vessel
80
small intestine
76
eye
65
embryo
65
liver
64
ureter
62
adrenal gland
60
placenta
48
thymus
42
artery
39
gonad
36
spinal cord
35
esophagus
34
skin of body
34
spleen
nerve
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
8
penis
5
mammary gland
4
bodily fluid
4
nose
3
blood
3
pituitary gland
2
lymphatic vessel
1
vein
Project
3092
AMP
5
ITG
Genome assembly (visualization)
2823
hg19
788
GRCh38
3
hg18
organ_slims!
nerve
BIOSAMPLE
TYPE
3097 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
sQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
5
1
3
1
2
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
2
7
1
1
1
brain
29
16
18
2
3
1
2
1
1
lung
33
17
16
1
1
+ See 260 more…
in vitro differentiated cells
neural progenitor cell
5
5
4
10
15
7
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
1
adipocyte
4
6
6
4
1
1
1
embryonic stem cell
1
5
6
1
1
cardiomyocytes
11
+ See 121 more…
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